PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077816.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 347aa MW: 36660.9 Da PI: 8.5451

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.5e-39	72	130	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_027077816.1 72 PESLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKST 130 57899***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MIQELLGEAA SGVLTGGERS KLPVDNGVSG ASSASPSLSP SPTPSPSPSP SPSPSPSSSA 60 VTLPPPTGSS TPESLRCPRC DSTNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI 120 GGGCRKNKST MITSSVIKSS AGKFKTMATE IGKSSFLSAF EHELSSSSPS SNPILWASPQ 180 NSHLFSLLKA NQSPNPNASP MCNSVVSTSM KKEEAAMPAG CYSLNACSRM VGFDSELGQQ 240 VPSVGLISSS SGWRNSEQHQ QQQIGFVLGQ GEFTGVQDFY QRLRSSRNCT YPDHAPVVLG 300 NIVSSSSSSS SSIQVLDSAP VAVAESGYWN SILSSWSDMP TTNGAYP

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MIQELLGEAA SGVLTGGERS KLPVDNGVSG ASSASPSLSP SPTPSPSPSP SPSPSPSSSA  60
VTLPPPTGSS TPESLRCPRC DSTNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI  120
GGGCRKNKST MITSSVIKSS AGKFKTMATE IGKSSFLSAF EHELSSSSPS SNPILWASPQ  180
NSHLFSLLKA NQSPNPNASP MCNSVVSTSM KKEEAAMPAG CYSLNACSRM VGFDSELGQQ  240
VPSVGLISSS SGWRNSEQHQ QQQIGFVLGQ GEFTGVQDFY QRLRSSRNCT YPDHAPVVLG  300
NIVSSSSSSS SSIQVLDSAP VAVAESGYWN SILSSWSDMP TTNGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-34	Dof family protein