PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027077903.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 234aa MW: 26589.7 Da PI: 6.1403

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027077903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.3	2.6e-11	121	178	4	61
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr+ +NRe+A+rsR RK++ +e+L++ v L N++L ++l + +++ +++ XP_027077903.1 121 ERKRRRMLSNRESAKRSRMRKQKHLENLRNQVSRLRIGNRELVNRLRVVTHHCQLVRT 178 46789999*************************************9999999986655 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MLSADGLFGN PFPAFESGFP PWDCQEPPFV FPQHDDPILS PLEELRVEAQ EPVISNSGSE 60 TYTPPPLDPT GQAISISGSE NYDPTPLDSS SGSEEPNQNN KRPYSGSDDT TNPAVDSAAD 120 ERKRRRMLSN RESAKRSRMR KQKHLENLRN QVSRLRIGNR ELVNRLRVVT HHCQLVRTDN 180 DRLRSESVIL RQRLWDIRQV LLVRQLQQQL ATSAWPCNNL TPMNDETIPQ PLIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	126	RKRRR
2	122	143	RKRRRMLSNRESAKRSRMRKQK
3	135	140	KRSRMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	3e-29	bZIP family protein