PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027078672.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 226aa MW: 25658.6 Da PI: 10.8239

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027078672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.4	5e-26	26	79	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtp LH++F++av++LGG+ AtPk+i+ m+++ +t +h+kSHLQkYRl XP_027078672.1 26 KPRIRWTPGLHNCFIKAVDRLGGPF-ATPKEIMTQMDIPEVTSSHIKSHLQKYRL 79 79*****************9997.**************************8 PP
2	Myb_DNA-binding	40.1	8.5e-13	30	78	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ ++ +++av +lGg+ t+k I+ m t ++ks++qky+ XP_027078672.1 30 RWTPGLHNCFIKAVDRLGGPfaTPKEIMTQMDiPEVTSSHIKSHLQKYR 78 9******************************778**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MAAKGNDTKI LHTSDRQLQV AENTRKPRIR WTPGLHNCFI KAVDRLGGPF ATPKEIMTQM 60 DIPEVTSSHI KSHLQKYRLR MGCNSGTAAD STVARKAATN TMFEADDGSN TAGWHTNDIR 120 YIQVQDFQST NSYLKKFVLL TPEASNLCKH KGLNLKGREK FARRRIQTMW GNIKCNVMGT 180 KTSIQAPDIK GEKGKREQKM KMFSIWKDKM GRRSKVIIIS NVHYST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.2	8e-18	G2-like family protein