PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027079853.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 298aa    MW: 32241.6 Da    PI: 7.4321
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027079853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.5e-4043104263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
  XP_027079853.1  43 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 104
                     7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDTAQWPQEI MVEPMEEIVV PNGSTTSCSK PGSSLERKVR PQKEQALNCP RCNSTNTKFC  60
YYNNYSLSQP RYFCKTCRRY WTEGGSLRNI PVGGGSRKNK RSSSSSSSSS VSSSKKLPDL  120
IPPSSHQNPK IHEGQDLNLG FSSSHDFKTI TELIQVPNFD NNNKENLTSS SSNSTTTSCH  180
LSALELLTGI TPIRGLSSFV PMPITTDPTV VYSSSGGFQL PEFKPSLSFS LDGLGSSGGY  240
GNLHGVQESS GGRPLFPFED LKQVSGTTST DVDQQNRDQH ADSTGYWTGV LGGGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.45e-45Dof family protein