PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027080002.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HB-other
Protein Properties Length: 213aa    MW: 24564.9 Da    PI: 5.5822
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027080002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.21.8e-10756957
                    HHHHHHHHHHHHHSSS.--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox  9 keqleeLeelFeknry.psaeereeLAkklgLterqVkvWFqNrRakekk 57
                    ke +++Lee Fe++ y p +e + +L k +gL+ +q++ WF  rR+k k+
  XP_027080002.1  7 KEKVKILEEKFEMSDYiPGEEVMHQLVKDTGLKADQIRSWFARRRQKSKN 56
                    68899*******966637888899***********************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MAPPLPKEKV KILEEKFEMS DYIPGEEVMH QLVKDTGLKA DQIRSWFARR RQKSKNEKQK  60
LILLKAKEEK KNDDETPAKE GESAELAARL KEKEVKIAEL EHLLKAKDAD IKSRKAAAGM  120
KDDDETQAMW LEGREADSRP ELEQQARERG KRKREEETDE LERKIAKQDA EIGSLRDQNA  180
ALHLQNAALQ VLIAALQEQL ENRVSWDDIR SLF