PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027081655.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 472aa    MW: 52227.7 Da    PI: 5.0192
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027081655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.85e-11127102128
             NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                     +kktLvf++grapkge+t+W+mheyr+
  XP_027081655.1   1 MKKTLVFHRGRAPKGERTNWIMHEYRA 27 
                     8************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MKKTLVFHRG RAPKGERTNW IMHEYRATEP DLDGTASGQA AYVLCRLFHK PDEKADSSKY  60
DEVEPSGSSP NTVKSSPDDA SSDLFQERLI LDMQVRKQPA GIERWLTDKS DDVTSNSLLH  120
VESCTSDVED HLIEAAITEV YPTTGGHPMC HESRDGLDCK VFSPLVSQNH TEIGCPDSPF  180
ADDFGCNQKG MHFQDGTSEQ DVSLTELLDV LQNYDAYPCK ESTSEKFLYV GSRSMLPDQL  240
HEGPAGNCNP RDWGAFGKAG EDMVIEQTRT CPRSFQSQAP IRDADSRLSN DGASHDHYAD  300
PVSLGGDHQE GTGIKIHRRQ ASNRPGCENL AKQGTAARRF RLQVDSAPIP IHDGKYSRAK  360
SFSNEEQDER SVTTEDDEYS ESSCTSNEPE GGSSSSESGT SARKFKAGLA LTNKEADEKD  420
KVKWKKFLLR PPGDSSGTGS LTVYGVSMYL VMVLFILFVF LWKCPNFFAL HI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-48NAC family protein