PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027081855.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 185aa    MW: 20235.6 Da    PI: 5.7248
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027081855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.6e-052244123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++Cg +F++++   +H r H
  XP_027081855.1 22 HVCHKCGWPFPNPHPSAKHRRAH 44
                    79*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MDVQDHKKTP SSAGGHEGHG VHVCHKCGWP FPNPHPSAKH RRAHKRVCGK VEGYKLVDSE  60
TDHISDDDHL SDDDIVKTPS PKMEKGSVKE VGSGAGIGLK SSKSEDDVFS DAVTEFSDSG  120
ISPSIEERLE SVREVDNTVG AELVHELNDS QKSEDCRADG KQLIRLVPCF LFFCFSCLNC  180
ICFLA