PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027082156.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 202aa MW: 23494.4 Da PI: 6.3094

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027082156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.7e-21	93	183	2	89
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYn Y++ +GFs+r+ + kk ++ +++ r +vCs+e + +e++ ++++r+ +a+tr++C a+lk+++++ +gk+ v+ +++eHnH+l XP_027082156.1 93 FYNIYGRAMGFSIRRGYAKKDlEDGTTVRYRSWVCSREREWDEKHILrNDRKREAKAVTRVNCGACLKIRLDDnEGKYIVSCFVKEHNHQL 183 9*****************955666777889**99888775547899999*************99*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MKRTMKIEQD MDENGHRKGK GHNFDLNAYA HCEDDIVAWK WMCGEMGVED SKADEKMNNM 60 VNGGAIDAEN VDDQQEIDLM TMKFDTIEDA ECFYNIYGRA MGFSIRRGYA KKDLEDGTTV 120 RYRSWVCSRE REWDEKHILR NDRKREAKAV TRVNCGACLK IRLDDNEGKY IVSCFVKEHN 180 HQLGNHASIP FMRSHRKVAD SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-17	FAR1 family protein