PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082171.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 202aa    MW: 23237.9 Da    PI: 10.7726
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind28.53.9e-094380239
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
    HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39
                    Fl+k+++++ed e++++isw+++g+s++vld+ +fa +
  XP_027082171.1 43 FLTKTFQMVEDTETNNMISWNSEGTSLIVLDHLKFAAE 80
                    9********************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEVRGGGIAG NGGIVRPSSL PSKQASEKME FMKGVRGFTP PPFLTKTFQM VEDTETNNMI  60
SWNSEGTSLI VLDHLKFAAE GFRKIGLRQY EYENKWFQRR QEHLLMNIRR RNDEGPTTRK  120
RRGSREQHVT AARPSMEAEL EIFEDHMNTL KKDITRSKYN MGKLESSIAT FKKNMKRMEA  180
KSKALIKVLA RIFSPALVEK II
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.15e-21HSF family protein