PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082278.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 172aa    MW: 19675.1 Da    PI: 8.2703
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.37.1e-115311754127
             NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     + k+w+f++ + + y           +gyW  t + k+++  +g++ g kk L++ +g+++ g++t+W++h++r
  XP_027082278.1  53 TGKKWFFYTVEPNDYV-------FSGDGYWTPTSE-KAIYI-GGQVDGYKKELIYCRGTEHPGKRTNWCIHQFR 117
                     5678999998888875.......4679*****976.99999.99*****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEKPSAASAR GNDDSGGKRT RIEVPVGCKF DPSDEELMFY LMNKILDSCE YSTGKKWFFY  60
TVEPNDYVFS GDGYWTPTSE KAIYIGGQVD GYKKELIYCR GTEHPGKRTN WCIHQFRQNP  120
DVYVANAIGN NVEYKKIYKK AGISTIYASR LYKPNLRGDF RGFDDYGFGF HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.14e-12NAC family protein