PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082659.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 221aa    MW: 24806.9 Da    PI: 6.2516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.1e-1856109156
             AP2   1 sgykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+G+r+++ +++  Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+++l+g+
  XP_027082659.1  56 PVYRGIRRRR-WNSnkWVCELREP---NKQSRIWLGTYPTAEMAARAYDVAALALRGH 109
                     68****9777.88888*******8...336**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MDASSSCSDP HPFGSLSDVS PTTAQRAINS DEEIILSSSR PKKRAGRKKF KETRHPVYRG  60
IRRRRWNSNK WVCELREPNK QSRIWLGTYP TAEMAARAYD VAALALRGHL ACLNFADSVW  120
RLPVPASRDA KDIRKAAAEA AEMFRSQEEL SSFGHGEALQ KNGEESTSSM FMDDEALFDM  180
HGLMVNMAEG LLLSPPHCLG ESYSFDEVES DAEVPLWSYT F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14765RKKFKETRHPVYRGIRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.19e-51ERF family protein