PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027082928.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 281aa    MW: 30575.7 Da    PI: 4.9688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027082928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.1e-1871120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  XP_027082928.1  71 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPSPEMAARAHDVAALSIKG 120
                     69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MICLTMTTDQ LQSLEPESSS NSIFSFSSSP TSPLSPNTAL KTSQNQSNNS NNQDAESKKI  60
KRIRDSSKHP LYRGVRMRNW GKWVSEIREP RKKSRIWLGT FPSPEMAARA HDVAALSIKG  120
TSAILNFPEL AGSLPRPASL SPRDVQAAAA KAAAMEKFDS LSSSSSSTSS TSPSSSNGRT  180
AASLTLSSSS SLSSLVSAID LSTTSEELSE IVELPSLGTM SFNETSMELR NDDFAYSDSV  240
DGWLYPPPDQ QLWMMSRNGH DDQDDQGGFS SGFESLLWNY Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-57ERF family protein