PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027082998.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 959aa MW: 103054 Da PI: 6.5569

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027082998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.8	2.8e-15	549	587	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_027082998.1 549 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 587 79**********************************876 PP
2	TCR	48.9	1.3e-15	633	671	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce C+N XP_027082998.1 633 RHKRGCNCKKSKCLKKYCECYQANVGCSDGCRCEACENV 671 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MDSSPEQPSK PNNSTHSPPL PIPPHQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP 60 PLVFRSPHIN PKSQPSFLKR PQSAGSSDAG LSEQNESCKD TLTVAEESRV SSCHLSSRLI 120 SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL 180 DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP 240 DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVFEVGCN LLSESLQVAQ DCGRSLENTG 300 VQCTESLENK VHGHCAQIVQ HQHGISRRCL QFEDTQGKII PNSGYQISSG SVGYPRSPAS 360 PAGSEVLESA SLNRPASPSN RLLANMTPPF FSPQTSGNYN SKLPKRSGIG LHLNSIVNSM 420 QMGSGAKVSM RSAERGSFNG LGKKSMSITG SSLRHNFSTS ANVEGVPISD ESRHNEHASD 480 AANSASTLSP CSMKPLYEPV VLKPIELQPN SSNKRMCTSE TSDSFVDFGQ SSPKKKRKKT 540 LDAGDGSGCK RCNCKKTKCL KLYCDCFAAG IYCAEPCACQ GCFNRPEYED TVLETRQQIE 600 SRNPLAFAPK IIQHLTEPPT NEDGSHFTPS SARHKRGCNC KKSKCLKKYC ECYQANVGCS 660 DGCRCEACEN VYGQKGEFGM IKDLISKHGE KLDSSFGTTL ESVASKDGLL HNELYNPHSL 720 TPLTPAFQCS DHGKGAPKAW LSSGGYLQSP ESCLTYLAPY GMSPGQAGNP DTHNMIIEAN 780 TGIMDLVSFG QGIGYGNEHT VNQLSPRCEV PRNDGRLAAL PDPQDWENTS RAQTYANHQV 840 SSANSLRWRR SSTHFDGNKP DEAADFDGGL YSILDDDTPE ILKEIPMPPN AIKVSSPNKK 900 RVSPPHGQGA ELGSSSSAGL RTGRKFILQA VPSFPPLTPC IDSKGATGMN NSQKSSSGK

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MDSSPEQPSK PNNSTHSPPL PIPPHQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP  60
PLVFRSPHIN PKSQPSFLKR PQSAGSSDAG LSEQNESCKD TLTVAEESRV SSCHLSSRLI  120
SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL  180
DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP  240
DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVFEVGCN LLSESLQVAQ DCGRSLENTG  300
VQCTESLENK VHGHCAQIVQ HQHGISRRCL QFEDTQGKII PNSGYQISSG SVGYPRSPAS  360
PAGSEVLESA SLNRPASPSN RLLANMTPPF FSPQTSGNYN SKLPKRSGIG LHLNSIVNSM  420
QMGSGAKVSM RSAERGSFNG LGKKSMSITG SSLRHNFSTS ANVEGVPISD ESRHNEHASD  480
AANSASTLSP CSMKPLYEPV VLKPIELQPN SSNKRMCTSE TSDSFVDFGQ SSPKKKRKKT  540
LDAGDGSGCK RCNCKKTKCL KLYCDCFAAG IYCAEPCACQ GCFNRPEYED TVLETRQQIE  600
SRNPLAFAPK IIQHLTEPPT NEDGSHFTPS SARHKRGCNC KKSKCLKKYC ECYQANVGCS  660
DGCRCEACEN VYGQKGEFGM IKDLISKHGE KLDSSFGTTL ESVASKDGLL HNELYNPHSL  720
TPLTPAFQCS DHGKGAPKAW LSSGGYLQSP ESCLTYLAPY GMSPGQAGNP DTHNMIIEAN  780
TGIMDLVSFG QGIGYGNEHT VNQLSPRCEV PRNDGRLAAL PDPQDWENTS RAQTYANHQV  840
SSANSLRWRR SSTHFDGNKP DEAADFDGGL YSILDDDTPE ILKEIPMPPN AIKVSSPNKK  900
RVSPPHGQGA ELGSSSSAGL RTGRKFILQA VPSFPPLTPC IDSKGATGMN NSQKSSSGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	535	539	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-63	CPP family protein