PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027083090.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 195aa    MW: 20894.1 Da    PI: 4.5694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027083090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-162168355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  XP_027083090.1 21 YRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAAIALKG 68
                    99**6..678*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSSTSSSGSP SRPSGGKHPM YRGIRSRSGK WVSEIREPRK TTRIWLGTYP TPEMAAAAYD  60
VAAIALKGSD IALNFPDRVS SYPAPASPSP SDIRSAAAGA AEMMKEKTAG GGDDDGKFPH  120
DQNQPGSSDH QELAFDQDRG LAGEDEFIDV EALIDMPNLL VDMAEGMLVS PPRIHSPPSS  180
DSPEHSDVDS LWSYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-34ERF family protein