PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027083095.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 233aa    MW: 25569.7 Da    PI: 8.7583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027083095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-181463255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        kr++lg+f tae Aa+a+++a+  ++g
  XP_027083095.1 14 KFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEAAARAYDEAAILMNG 63
                    89****999.**********8.....335**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MIQRTTTNMV PSRKFRGVRQ RQWGSWVSEI RHPLLKKRIW LGTFETAEAA ARAYDEAAIL  60
MNGQNAKTNF PVVKENPNEP SPKTSTDHQD SPPLSVTAPP AESLSEILSA KLKKCCKDPA  120
PSLTCLRLDN SQIGVWQKRT GRHSGSNWVL KVELGKNKDH QNSTQQASLC SSSSTTTATT  180
TSSSSGSSTT SSGTTAIDQH ETGVGMDEEN RVAMQMVEEL LNWNCPPPYL TNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.29e-56ERF family protein