PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027083683.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YA
Protein Properties Length: 181aa    MW: 20262 Da    PI: 9.6443
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027083683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.68.9e-3363119158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RR++Rak+e ekkl +k+rkpylheSRh+hAlrR+RgsgGrF
  XP_027083683.1  63 QEPVYVNAKQYHGILRRRESRAKAELEKKL-IKARKPYLHESRHQHALRRARGSGGRF 119
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MWSLSFGRDI SCLRNYLLFC PPLQACASNP YPDPYFWQGQ PLVHPPLIDM HHARMPLPLE  60
MTQEPVYVNA KQYHGILRRR ESRAKAELEK KLIKARKPYL HESRHQHALR RARGSGGRFA  120
KKTDANDSMG SCSSSAISSH GSFERPNSSQ EVTQDSVNGA GGYLPGQLCG NVPSKQVDSM  180
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-31NF-YA family protein