PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027084196.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 413aa    MW: 45997.1 Da    PI: 7.5301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027084196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20234284255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAaka+++a+ k++g
  XP_027084196.1 234 HYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTFDTAIEAAKAYDRAAFKMRG 284
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MATPDEVLAL RQIQEHLFGE LSPTALFFGP ELVIDGDSNL GASNCSSQSQ SQSDSSFGSD  60
SASYDHDHNS NSNSSPSSPV PITDYLSTAD EAEKKQNHCF DHFAQNSVSF ERNDPDFFKH  120
CQTNTIINFS RAPKFETIDF SEFEQKPQVI DLTSSPKPPQ SARDGKPSPT ILPPVKQCAR  180
DRKPSLTILP PVKKFEWIEF SESTQSKQVI EQARQMSLPT QSTQPKKAAE DQRHYRGVRQ  240
RPWGKYAAEI RDPKRRGSRV WLGTFDTAIE AAKAYDRAAF KMRGSKAILN FPLEAGKHAS  300
ESRASSSNKR RREAEEVVVK EVNKCQTSSV VKSEPRASSS NKRGREAEEV AVKEAKKCQT  360
PSAVKSEPES EWPFTPSSWS AMWEENVDGV FNFSPLSPVS PHPPLGCAQV RVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.11e-43ERF family protein