PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027084303.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 556aa MW: 61103.7 Da PI: 8.776

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027084303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.8	5.1e-14	133	173	1	42
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 k+kk+CnCk+s+Clk+YCeCfa+g++C+ C+C++C+N++e+ XP_027084303.1 133 KKKKQCNCKNSRCLKLYCECFASGTYCNG-CNCTKCHNTSEH 173 589************************.******9986 PP
2	TCR	51.4	2.2e-16	218	257	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgCnCkks ClkkYCeCf+a + Cse+C+C dCkN e XP_027084303.1 218 KHNKGCNCKKSGCLKKYCECFQASVLCSENCNCIDCKNFE 257 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MEPMEASSPT APKNGFPVKR LARQLDFTAT PAMCRPLAAN VILPEHPQAQ LQSKLLALAK 60 PAPPAILVSQ PQVVSGEKSP PSRAMQQRRK PKVPVVMRLA HTVRRPTSQE VNKCGSPKLP 120 DQRSIELRDA TPKKKKQCNC KNSRCLKLYC ECFASGTYCN GCNCTKCHNT SEHEAQRKEA 180 IEIILERNPD AFQPKIAKSP IGTTDGSVEA YDVTIMGKHN KGCNCKKSGC LKKYCECFQA 240 SVLCSENCNC IDCKNFEGSK ERDYMFHEGP TNDFRFVNQA INAAICGTSK FSYFNTLPAT 300 KKRKTEQLIC RATSVDAVKD RIEQIRQEND LAPTTASFSP LSAPSAQPTT AMKFTHRPLL 360 AEILQSKHLK ELCSLLVVVS AEAAKKISGK KHVMNKGDIE EVETSISSAI QGSKDVHAQY 420 RNESFNTSQV EGNLAYGCQS GEGDRETGSS ASPETLPLMS NDRDVATEGA DSPSGASNPK 480 RNTTIKSPNR EVFKEIDAEQ ERLVLKNFCG FLNKLITCTI IRETSHLSLS RNGLESQLGV 540 VQNCNSNPTI QTRKSV

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MEPMEASSPT APKNGFPVKR LARQLDFTAT PAMCRPLAAN VILPEHPQAQ LQSKLLALAK  60
PAPPAILVSQ PQVVSGEKSP PSRAMQQRRK PKVPVVMRLA HTVRRPTSQE VNKCGSPKLP  120
DQRSIELRDA TPKKKKQCNC KNSRCLKLYC ECFASGTYCN GCNCTKCHNT SEHEAQRKEA  180
IEIILERNPD AFQPKIAKSP IGTTDGSVEA YDVTIMGKHN KGCNCKKSGC LKKYCECFQA  240
SVLCSENCNC IDCKNFEGSK ERDYMFHEGP TNDFRFVNQA INAAICGTSK FSYFNTLPAT  300
KKRKTEQLIC RATSVDAVKD RIEQIRQEND LAPTTASFSP LSAPSAQPTT AMKFTHRPLL  360
AEILQSKHLK ELCSLLVVVS AEAAKKISGK KHVMNKGDIE EVETSISSAI QGSKDVHAQY  420
RNESFNTSQV EGNLAYGCQS GEGDRETGSS ASPETLPLMS NDRDVATEGA DSPSGASNPK  480
RNTTIKSPNR EVFKEIDAEQ ERLVLKNFCG FLNKLITCTI IRETSHLSLS RNGLESQLGV  540
VQNCNSNPTI QTRKSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-111	CPP family protein