PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027084800.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 397aa    MW: 44279 Da    PI: 4.7745
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027084800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.9e-18124173255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f tae Aa+a++  +++++g
  XP_027084800.1 124 HYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEAAARAYDTEARRIRG 173
                     7********.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MCGGAIISDY IQPSRSSHRL SADLLWGIGG SGDLPDSKDI KKKKSTSNFY SKQLRSEIID  60
LDDEFEADFR EFSDQAVEEL EDVKPFGFSA SKHSAILSRG TKCGNSSDSS DESGKYLKRK  120
RKNHYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEAA ARAYDTEARR IRGKKAKLNF  180
PDDTQLSASR RTVVANAQKV RVKEDQSQAQ PSLNESMTFM SNIENDHCNS LNLVEEKPPA  240
KQFSSVDAYP TVGDMEFKSY FQSDCANLCF NSDQGSSSFG CSDFGWEEQC PKTPEISSIF  300
SSAIDWEEPQ FVEDANSSKN LKTSPLDLVP ADGNNKKLSE EFSAFESQMK VAQMPYLEGN  360
WDASLDAFLN GPAVKDGGDE MDLWTFDDIS AMMGGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-62ERF family protein