PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027084837.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 404aa MW: 42617.7 Da PI: 7.3464

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027084837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.9	1.6e-21	300	362	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ e+++l +++ XP_027084837.1 300 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRAEVNRIRSEYDQLLAQN 362 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGSSEMDKSS KEAKEAKESK TPPQEQPSAP STGTPDWSGF QAYSPMPPHG FLASSPQAHP 60 YMWGVQHLMP PYGTPPHPYV AMYPPGGIYA HPSIPPGSYP FSPFAMASPN GVAEASGNTP 120 GNTEVDGKPS EGKEKLPIKR SKGSLGSLNM ITGRNNEPGK TAGASANGAY SKSGESASDG 180 SSEGSDANSQ NESQMKSGQR QDSAETSQNG SAAHGSQNGG PNTPHSMVNS VPMVPISAPG 240 APGGLSGPTT NLNIGMDYWG SAASPTVPAM RGKVPTAPVA GGMVTGGRDG VQSQLWIQDE 300 RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRADALKEE NASLRAEVNR IRSEYDQLLA 360 QNASLKERLG EVPGPDDPRS SRNEQHAGND AQHSGQAEPL QRGQ

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGSSEMDKSS KEAKEAKESK TPPQEQPSAP STGTPDWSGF QAYSPMPPHG FLASSPQAHP  60
YMWGVQHLMP PYGTPPHPYV AMYPPGGIYA HPSIPPGSYP FSPFAMASPN GVAEASGNTP  120
GNTEVDGKPS EGKEKLPIKR SKGSLGSLNM ITGRNNEPGK TAGASANGAY SKSGESASDG  180
SSEGSDANSQ NESQMKSGQR QDSAETSQNG SAAHGSQNGG PNTPHSMVNS VPMVPISAPG  240
APGGLSGPTT NLNIGMDYWG SAASPTVPAM RGKVPTAPVA GGMVTGGRDG VQSQLWIQDE  300
RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRADALKEE NASLRAEVNR IRSEYDQLLA  360
QNASLKERLG EVPGPDDPRS SRNEQHAGND AQHSGQAEPL QRGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	323	RRSRLRK
2	317	324	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-148	bZIP family protein