PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027085394.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 280aa MW: 30518 Da PI: 6.5172

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027085394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.8	2.1e-17	101	154	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +lkr +r+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l +++ XP_027085394.1 101 DLKRIKRMVSNRESARRSRRRKQAHLADLEQQVEQLRGENGSLFKQLGDASQQF 154 69*****************************************97776655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MILFKSSVGI LLEISNVLTR SDASMDNPHW SHNLASRHSS LSATIDSQSS ICVGSPTSAT 60 KSKGKDKRAM VATSGSSPEQ SDDDEVETEA GQCEESTDPM DLKRIKRMVS NRESARRSRR 120 RKQAHLADLE QQVEQLRGEN GSLFKQLGDA SQQFKDASTN NRVLKSDVEA LRAKVKLAED 180 MVTRGSLTSS LSHLLQNYLS TPESLNNANM CRGENVSTIV TVRGVDPTYP DVGVSVQNSA 240 ARMGNVDNFN GDLKNGVTND AMICMADLWP WESHAGSVTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	123	RRSRRRKQ
2	118	123	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	7e-59	bZIP family protein