PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027086470.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 206aa    MW: 23527.9 Da    PI: 8.8412
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027086470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.11.2e-1761442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p Gf+F+P++eel+ + L  kv+++  e+ +++ke  +y  ++ePwd                k +++++ +  F+k +k   ++k++ r+t+ g
  XP_027086470.1   6 PIGFHFRPSEEELI-FLLWLKVANQLDET-DHVKENILYgeSAEPWDVLGdddvcwqfyddsgKGASTKRMVCVFTKLKKL--SSKKTARTTSLG 96 
                     89************.88888998888777.6777765553367****9634678888877654333344455777777665..45799******* PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W +  k+  v +  +ge++g +++L +  ++ +k +k  W+mhey +
  XP_027086470.1  97 MWDEETKSYLVEDMiTGEKIGSRRMLSYVLNSGSKRVKVGWIMHEYLV 144
                     ****99998888778999***********9999*************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MADNIPIGFH FRPSEEELIF LLWLKVANQL DETDHVKENI LYGESAEPWD VLGDDDVCWQ  60
FYDDSGKGAS TKRMVCVFTK LKKLSSKKTA RTTSLGMWDE ETKSYLVEDM ITGEKIGSRR  120
MLSYVLNSGS KRVKVGWIMH EYLVDGASLN GLNNSHNTDY VPCRTIKDDS KYTKVKESRK  180
KGKIAKEKEV GNRVRCEVVL GKKVHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-09NAC family protein