PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027086507.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 154aa MW: 17962.1 Da PI: 4.1285

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027086507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.8	2.3e-15	2	117	17	128
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 yL++k+ + +l + i+++d++ + P +Lp + +++ ++w+ ++ + + n t +gyW +t + ++++ +g+ XP_027086507.1 2 VYLRNKIMRGCDDLPDYIPTADVFGTSPDQLPFiwnfgcdssiayrCEYSTGEKWFCYTVEPN-------DNVFTGDGYWTTTSE-EAIYI-DGQ 87 5********999999***********6577877776665422334556766666544.......56789*98866.88999.899 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + g kk +++y g ++ ge+t+W +h++rl XP_027086507.1 88 VDGYKKEFIYYCGMERPGESTNWYIHQFRL 117 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MVYLRNKIMR GCDDLPDYIP TADVFGTSPD QLPFIWNFGC DSSIAYRCEY STGEKWFCYT 60 VEPNDNVFTG DGYWTTTSEE AIYIDGQVDG YKKEFIYYCG MERPGESTNW YIHQFRLNPD 120 VYIVNDVGNN VEYKISIVVA YMEFRKETVV QSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	6e-09	NAC family protein