PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027086509.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 236aa    MW: 26153.7 Da    PI: 4.1806
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027086509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof66.25.5e-211372662
          zf-Dof 26 lsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +sqPryfCk+CrryWtkG +lrnvPvGgg+rk ++s+
  XP_027086509.1  1 MSQPRYFCKGCRRYWTKGRSLRNVPVGGGCRKTRRSK 37
                    68*******************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSQPRYFCKG CRRYWTKGRS LRNVPVGGGC RKTRRSKSAR QADRLGLIYQ MPSPDSASDE  60
SNNSSNGADI DLAAVFTKFL NQDNSSNDLG KIHVSTDQES SSSGASCTSL DLPLGSLDRA  120
NQIENMIFQC QKPPDFIDED QMHEGHPSLS IDVDNVEELL DQNCNAFELQ TILGEEIGED  180
ASLSDGISLP NFEWQSTLQF QDFGSFSTDE AMKIPSNLAD DNWNTFDVSN LAIFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.11e-22Dof family protein