PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027087532.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family MYB_related
Protein Properties Length: 78aa    MW: 9075.26 Da    PI: 10.0979
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027087532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.9e-082964239
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                       ++++E+ l ++  ++ G++ W++Ia +++ gRt+ +
   XP_027087532.1 29 PEFSEDEEMLMARMYRLVGPR-WALIAGRIP-GRTPQE 64
                     689****************99.*********.***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MADRSHRTRV DGNDKVEKEG TIKRRESKPE FSEDEEMLMA RMYRLVGPRW ALIAGRIPGR  60
TPQEMEKYFT SKNASTSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-17MYB_related family protein