PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027087549.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 827aa MW: 95140.5 Da PI: 7.2241

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027087549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.1	1.7e-24	70	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+++ + +r f+Cs+egk+ ++k++ + +r+etr++C a++k++ ++ +k++v +++ eHnHel+ XP_027087549.1 70 NFYQKYAKASGFGTRLSKGHKDKNSDLMLDRIFCCSREGKKPKDKRN-MIVKCPRPETRCDCSARMKISCRQGEKYRVVQFVAEHNHELS 158 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MENDLPTHEV QSCRKLDFED VDLQEINDNA LPLCITDGNQ GNQIFLPLAI PDDLVPKLDM 60 EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR IFCCSREGKK PKDKRNMIVK 120 CPRPETRCDC SARMKISCRQ GEKYRVVQFV AEHNHELSTP SKTHLFRSHR HVTMAHEAEI 180 DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQCD TGGILEYLQG 240 MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMGKIP RTILTDQDGR MATALASQWP 360 TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSQCIYDY ENEDDFFEGW SEMLKTYGLE 420 DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHG LLEFFEHFQR 480 LLDDRRYNES VADFKGNQST PAMTFPCRIL QHAASVYTHE VYEKFKEELC KGIDCKWEVD 540 GELGNQMSYR VTPHGKTSHH LVTYDSSTNS ICCSCKKFEF AGFLCSHALK ILMTLNIVTI 600 PDAYILKRWT KAAKTGNVHV SSESSPEMEL KAKLSFRYKE LSYLYMQLMT KASECDEAYE 660 IAKDGFWKMS EQMDACCQGK KKMKEVRIEE HCSVYQDVDT NPSEIAYNKI KGIKVKEKVT 720 YKSSKRPRSA LEMATKKRKY KVKEKFSSKR LQEFGHNVVN SSMDSATIQG FARELPPQQL 780 SNQVITPQVV AAPLAQAFDR TGGVLRPGDT EFSDNLTHET FGVEAAN

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MENDLPTHEV QSCRKLDFED VDLQEINDNA LPLCITDGNQ GNQIFLPLAI PDDLVPKLDM  60
EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR IFCCSREGKK PKDKRNMIVK  120
CPRPETRCDC SARMKISCRQ GEKYRVVQFV AEHNHELSTP SKTHLFRSHR HVTMAHEAEI  180
DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQCD TGGILEYLQG  240
MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV  300
GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMGKIP RTILTDQDGR MATALASQWP  360
TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSQCIYDY ENEDDFFEGW SEMLKTYGLE  420
DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHG LLEFFEHFQR  480
LLDDRRYNES VADFKGNQST PAMTFPCRIL QHAASVYTHE VYEKFKEELC KGIDCKWEVD  540
GELGNQMSYR VTPHGKTSHH LVTYDSSTNS ICCSCKKFEF AGFLCSHALK ILMTLNIVTI  600
PDAYILKRWT KAAKTGNVHV SSESSPEMEL KAKLSFRYKE LSYLYMQLMT KASECDEAYE  660
IAKDGFWKMS EQMDACCQGK KKMKEVRIEE HCSVYQDVDT NPSEIAYNKI KGIKVKEKVT  720
YKSSKRPRSA LEMATKKRKY KVKEKFSSKR LQEFGHNVVN SSMDSATIQG FARELPPQQL  780
SNQVITPQVV AAPLAQAFDR TGGVLRPGDT EFSDNLTHET FGVEAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-138	FAR1 family protein