PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027089426.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 230aa    MW: 25179.1 Da    PI: 5.7417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027089426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-1955104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr++  +g+WvAeIr+p     +  +r++lg+f t +eAa+a++ a+k+l+g
  XP_027089426.1  55 TYRGVRQRT-WGKWVAEIREP-----NhgARVWLGTFNTSYEAARAYDDAAKRLYG 104
                     69****999.**********9.....336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MMERVENEGV NVGIPVDKKP KKEAAISTSM KKITVGGSRK GCMRGKGGPE NAFCTYRGVR  60
QRTWGKWVAE IREPNHGARV WLGTFNTSYE AARAYDDAAK RLYGKCAKLN LPEEDQPPSP  120
PGSSSVASAA YSNNTGYKNG QDLTNEHQSP ELEDKKNGTS VLDEVSIFKD INGEFAFDET  180
PAPSLLGEEQ ILNWPEYPFD NGFHWSNDGG ISVGGLIDHA VVYKLLGPPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.15e-42ERF family protein