PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027089734.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bZIP
Protein Properties Length: 266aa    MW: 29162.5 Da    PI: 9.5737
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027089734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71e-12193238448
                     XCHHHCHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKka.eieeLeekvkeLeaeNkaLkke 48 
                       r +r++kNRe+A rsR+RK++ ++ eLe kv+ L +eN +L+ +
  XP_027089734.1 193 CHRNKRMIKNRESAARSRARKQQaYTSELEIKVARLMEENAKLRRQ 238
                     5799*****************7549******************954 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDNRGSSTTS TKTKDNINTT VQISAPTSKS SSSIPTSSPI PIAPAPAPPS SCNSKYSMEE  60
VWKDICPSAL LHHPTSTSSS AAALEGIVFQ EFLSRPSRAQ YDSTSRHHHH HPGRQSSLES  120
IDRGSFGSHS QGQPAPAATA SITLSLNSTR PPPSSSFSLP LDHDLDADAN LNPPTVEFSI  180
LPEKRASQDE DTCHRNKRMI KNRESAARSR ARKQQAYTSE LEIKVARLME ENAKLRRQQQ  240
EKHCLQQAPA PFPKKQMLCR TLTAPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207215ARSRARKQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-15bZIP family protein