PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027089971.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 269aa    MW: 30337.1 Da    PI: 7.1239
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027089971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.25.1e-30171511128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka..eekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lppG rF P++++lv++yL+ k +g+++  ++vike+d+y+++P +Lp+    ++ +  ++++wy +++r     +++ ++r++  gyWk+ g+ 
  XP_027089971.1  17 LPPGSRFYPSEQQLVCYYLTSKNNGTNCYGKDVIKELDLYNFNPFNLPEsgcfRFGSggRRRHWYCYVRRVVL--RETGRRRVAGGGYWKKRGRV 109
                     79**************************999*****************5577744442144577777776665..555678999*********** PP

             NAM  90 kevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     ++v+++  ++ +vg++k++ fy+g +++++++t+W + ey+l
  XP_027089971.1 110 RDVIDAgaGKVVVGTRKSFDFYSGdSHENAVRTRWALYEYAL 151
                     *****9777788**********996778899*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MRGEDPMPPD DPTSFCLPPG SRFYPSEQQL VCYYLTSKNN GTNCYGKDVI KELDLYNFNP  60
FNLPESGCFR FGSGGRRRHW YCYVRRVVLR ETGRRRVAGG GYWKKRGRVR DVIDAGAGKV  120
VVGTRKSFDF YSGDSHENAV RTRWALYEYA LNDRHMGSFV LCRVFKKSDL GHNLSEHNIS  180
SCGEESVATV RHIGVQYDGS VTSVIGESKM HDKSTQNDDN EVLKLPTGQG NELDKTISLK  240
PVSEQDLKTI LEGDYIEVDD LLCLLPGVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-20NAC family protein