PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090069.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 189aa    MW: 21415.9 Da    PI: 7.7585
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.58.4e-26251432128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     p G+rF+Ptdeel+  yL++k+ g + +l + i+++d++ + P++Lp   + ++  k+w+f++  ++           t +gyW  t + ++++ 
  XP_027090069.1  25 PCGCRFDPTDEELM-VYLRNKIMGGRDDLPDYISTADVFGTSPNQLPfDrCEYSAGKKWFFYTVGQN-------DDVFTGDGYWTPTSE-EAICI 110
                     89************.8*************999***************63455567889999998655.......456899*******87.66777 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +g++ g kk +++y g+++ g++t+W +h++rl
  XP_027090069.1 111 -DGQVDGYKKEFTYYCGTEHPGNRTNWYIHQFRL 143
                     .799****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEKPSAASAG GNNDNRGKRA PVEVPCGCRF DPTDEELMVY LRNKIMGGRD DLPDYISTAD  60
VFGTSPNQLP FDRCEYSAGK KWFFYTVGQN DDVFTGDGYW TPTSEEAICI DGQVDGYKKE  120
FTYYCGTEHP GNRTNWYIHQ FRLNPDVYGA SAVGNNLDYK ISSVVACMVF RKEAVVQSNR  180
RKIKRKRKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180186RRKIKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.11e-18NAC family protein