PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027090070.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 173aa MW: 19433.7 Da PI: 7.2424

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027090070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.8	2.4e-11	25	71	2	49
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 p G+rF+Ptdeel+ yL++k+ g + +l + i+++d++ + P++Lp XP_027090070.1 25 PCGCRFDPTDEELM-VYLRNKIMGGRDDLPDYISTADVFGTSPNQLPF 71 89**********.8*********999************93 PP
2	NAM	33.4	1.3e-10	78	127	77	128
NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t +gyW t + ++++ +g++ g kk +++y g+++ g++t+W +h++rl XP_027090070.1 78 FTGDGYWTPTSE-EAICI-DGQVDGYKKEFTYYCGTEHPGNRTNWYIHQFRL 127 5899****87.66777.799**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MEKPSAASAG GNNDNRGKRA PVEVPCGCRF DPTDEELMVY LRNKIMGGRD DLPDYISTAD 60 VFGTSPNQLP FGQNDDVFTG DGYWTPTSEE AICIDGQVDG YKKEFTYYCG TEHPGNRTNW 120 YIHQFRLNPD VYGASAVGNN LDYKISSVVA CMVFRKEAVV QSNRRKIKRK RKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	170	RRKIKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	2e-16	NAC family protein