PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090099.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 277aa    MW: 30422 Da    PI: 8.8344
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.42.6e-3174128358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     ++rY+eClkNhAas+Gg+++DGCgEfmps geegt +a+kCaAC CHRnFHR+e++
  XP_027090099.1  74 STRYRECLKNHAASIGGNVTDGCGEFMPS-GEEGTLEAFKCAACHCHRNFHRKESS 128
                     689*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MRIPPGSLGY DPLENLDHST ATHHHHHIQH PEDQLIHQEK SSRGPGATAA ALSSGGSKSK  60
TPTPTAGRSH STSSTRYREC LKNHAASIGG NVTDGCGEFM PSGEEGTLEA FKCAACHCHR  120
NFHRKESSGD GAIVVHQLPL PPPLPSPSMN QHRGESMNVH ANHWTTMVQP VKMAFGGGSA  180
SAATDSSSEE LNFNAYQSTS VPPPPQFVLA KKRFRTKFSQ EQKDKMLAFA EKLGWRIPRE  240
DDTEVQRFCT EVGVKRQVFK VWMHNNKNSA KKNPQES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.13e-57ZF-HD family protein