PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090185.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 174aa    MW: 19547 Da    PI: 5.2457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.2e-201465155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p  +  ++r++lg+f+t+e+Aa+a++ a+  l+g
  XP_027090185.1 14 SVYRGVRKRK-WGKWVSEIREPAGD--KRRIWLGSFDTPEMAAAAYDTAAFHLRG 65
                    78*****999.**********9666..4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MESNNVKKKV GTPSVYRGVR KRKWGKWVSE IREPAGDKRR IWLGSFDTPE MAAAAYDTAA  60
FHLRGQAAQL NFPHLVDYLP SPASSSVEDM RLAAHEAGIP VTVVDYVAQP VTVGLSQREI  120
QAIHDLPLES PNYNMWMEMT SGSKFLGDPV IFPGDYDHEM TDYVEVPDDS LWNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1723KKKVGTPSVYRGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.18e-48ERF family protein