PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090466.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 165aa    MW: 19002.6 Da    PI: 8.9718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.94.4e-125598553
             AP2  5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53
                    G r++k +g+W+AeIr  +     + kr++lg++   +eA +a++a r+ +
  XP_027090466.1 55 GLRQRK-WGKWAAEIRNpF-----KgKRIWLGNYFI-KEASRAYEAKRLGF 98
                    889999.**********55.....45**********.*********99855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MAEPTRPVRK IRVFCYDSDA TDTDSSADES MIEKRPKRFL REIILPIVEL IRQPGLRQRK  60
WGKWAAEIRN PFKGKRIWLG NYFIKEASRA YEAKRLGFEA RAMVDQSASE KCSNVNHEYN  120
NQSSSMAVSQ PHNQNDIPSC IFEDSAESLV GVRRICYSGY GFCGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-18ERF family protein