PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027090665.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 168aa    MW: 18535.7 Da    PI: 5.0425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027090665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.3e-151766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +++G+r++k +g+Wv+eIr+p   g +  r +lg++  +e Aa a++ a  +l+ 
  XP_027090665.1 17 RFRGIRRRK-WGKWVSEIRVP---G-TqDRLWLGSYAAPEAAAMAHDIAYYCLRE 66
                    79****998.**********8...3.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MSSSDEGGSS CSTSQKRFRG IRRRKWGKWV SEIRVPGTQD RLWLGSYAAP EAAAMAHDIA  60
YYCLRENASL DDFNFPLMLP AGVQRGMSPR SVQKAATDAG MAVDAQIIAK RPADSPVKVE  120
ENVVNSRPEE RFSPCGNDGF SDIPSWEGKE FSRELGDQAL NISVDDYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.13e-43ERF family protein