PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091069.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 280aa MW: 28282.2 Da PI: 7.4743

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.1e-39	23	82	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+ +ss XP_027091069.1 23 PEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGSRKSSSSS 82 57899**************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MSSETGDPRP ARLSTMATRP SEPEHLPCPR CDSTNTKFCY YNNYNLSQPR HFCKSCRRYW 60 TRGGTLRNVP VGGGSRKSSS SSSSSSSSSN KRPRTASGTN SPTATTPTAS SSSDSMAQAH 120 HHEPPLHANP VAMLPQMGSG SGPTAGHLMG CEVNLNEAVP EASSFSTLLT TTPGNMFPFG 180 GGYGLGLGPG LHGLGFGLGG MDWPMESVVA GQGNGGGVGG AGVGVGGGDG MSDGSGAGGS 240 SSSGCNNTWQ MGSGVEGGLA EGDCFGWPDL AISMPGKGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	4e-32	Dof family protein