PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091561.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 351aa MW: 38662.4 Da PI: 7.9325

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.9e-32	131	184	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027091561.1 131 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 184 9****************************************************7 PP
2	Myb_DNA-binding	45.6	1.6e-14	132	183	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_027091561.1 132 RMRWTSTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 183 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MRNTGSSFPD LSLQISPPSL RNYDIKEVGY EIGLMVKSSY PSDRSSTTDS GSCGSDLSHE 60 NGGFDPERSL SYPSVDPTLS LGFDMAVSNP LPLQPPRNFQ AYHHYQPQIY GRDFKRNSRM 120 INGLKRSVRA PRMRWTSTLH AHFVHAVQLL GGHERATPKS VLELMNVKDL TLAHVKSHLQ 180 MYRTVKSTDK GAAGPIGQTD VVLSQRTGMA EVESLEAGVE LSCEKAGSNP SANSINISLP 240 SSSPSLPTTL HNAQRPSCEL PPRTNIWCHP SQENSLRCYQ HGDKDTKGAG IDSLHHMSGK 300 MEKKLDSNST NRSMLASSDM LLNLEFTLGR SSWQLDHDAN NTTDLTINLK C

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MRNTGSSFPD LSLQISPPSL RNYDIKEVGY EIGLMVKSSY PSDRSSTTDS GSCGSDLSHE  60
NGGFDPERSL SYPSVDPTLS LGFDMAVSNP LPLQPPRNFQ AYHHYQPQIY GRDFKRNSRM  120
INGLKRSVRA PRMRWTSTLH AHFVHAVQLL GGHERATPKS VLELMNVKDL TLAHVKSHLQ  180
MYRTVKSTDK GAAGPIGQTD VVLSQRTGMA EVESLEAGVE LSCEKAGSNP SANSINISLP  240
SSSPSLPTTL HNAQRPSCEL PPRTNIWCHP SQENSLRCYQ HGDKDTKGAG IDSLHHMSGK  300
MEKKLDSNST NRSMLASSDM LLNLEFTLGR SSWQLDHDAN NTTDLTINLK C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	4e-58	G2-like family protein