PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027092344.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 187aa    MW: 21165.4 Da    PI: 6.5317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027092344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-1659105151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     ++y GVr++  +gr++AeIr p++   + r++lg+f+taeeAa a++ a  
  XP_027092344.1  59 TRYLGVRRRQ-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLASI 105
                     5799***887.**********865...5*******************9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSFASINYKP RSFWFLGSRS LNTYTYCLAS QEKPGPNNME NFSQMVARDQ GRRSSRRSTR  60
YLGVRRRQWG RYAAEIRNPY TKERHWLGTF DTAEEAAVAY DLASISFSGI QKARTNFVYP  120
FLALPSPSTS PSPPSPPPPP PPTPDLEEVH QSCAEVSSFE DDDDESLFIA SVLESFRQSS  180
FDGTQKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.13e-28ERF family protein