PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027092766.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 180aa    MW: 20326.9 Da    PI: 5.0936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027092766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.9e-161462355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y G+r++k +g+Wv+eIr+p   gk+ r++lg++  +e Aa+a++ a++ l+g
  XP_027092766.1 14 YIGIRQRK-WGKWVSEIREP---GKKSRIWLGSYEAPELAAAAYDVAALHLKG 62
                    89*****9.**********8...557***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MAQEIRNEYA RQSYIGIRQR KWGKWVSEIR EPGKKSRIWL GSYEAPELAA AAYDVAALHL  60
KGARARLNFP ELGENFPKPA SSSAEHIQMA AQEAAMWFKR QIQGQEVNEC GGDYAKSSLV  120
PARVGLSSSQ IEALYESPLD SPKMWMELTG ALFSAEPMVF YGQEEFGHSE EFIVYNSIWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.18e-43ERF family protein