PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027092904.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 293aa MW: 32848.2 Da PI: 4.5288

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027092904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.8	1e-37	29	88	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+a +cprC s+ntkfCyynnys+sqPryfCk+CrryWtkGG+lrnvPvGgg+rk ++s+ XP_027092904.1 29 ESAPNCPRCASSNTKFCYYNNYSMSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKTRRSK 88 56779***************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MFTSTSDHAM FDCPSRPPVM GRRWKSSTES APNCPRCASS NTKFCYYNNY SMSQPRYFCK 60 GCRRYWTKGG SLRNVPVGGG CRKTRRSKSA RQADRLGLIY QMPSPGRASD ESNNSSNGAD 120 IDLAAVFAKF LNQDDSSNDL DKIHVSTDQE SSLSGLSRTS LDLPLGYLDR ENQIEDMIFQ 180 CQKPTDFIDG DQMHEGHPSL SMDVDNIEEL LDQNCNAFEL QAILGEEIGE NASLSDGRSL 240 PNFEWQSTLQ FQDFGSFSTD DAMKIPSNLA DDNWNTFDVS AGYEIFSRPW NCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	2e-42	Dof family protein