PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027093040.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 726aa MW: 80438.7 Da PI: 7.2252

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027093040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	463	500	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ L++++gL+++qV++WF N R + XP_027093040.1 463 FEHflHPYPSDADKHLLSRQTGLSKNQVSNWFINARVR 500 664559******************************88 PP
2	BELL	111	6.8e-36	323	394	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++e q+kk+kLls+l+eVd rY +y+eq+q+++ sF+ v+g+g+a+pYt+lA+ka+SrhFr++kdai +q+ XP_027093040.1 323 EKTEYQRKKVKLLSMLDEVDARYTHYCEQMQAIVHSFDSVIGYGAAAPYTNLAQKAMSRHFRSIKDAILGQV 394 57899****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MSQSFHQGIY SFSNGYERSP TTTKQGMEWI SQRVQNFELQ QQQQVQTEVN SGEPPVYDDT 60 GGGMLTEMID FSRGRGKSAN HLLLDGQIPS SYRWSQKQQL PLTVVNEAEL LLMNPLHVKA 120 SSSSPTSTSS LHMSVPNSSD SHHPSLHLQE YHLENPSQFS WVRVNGNEVD DDNTKIGRAM 180 EAQGLSLSLS SSMPNLEAAK FQELRPGDGG VYFFDQGVGP PMNFSGFKNQ EPNPNILGNI 240 VTDYSSQVHV GLPASSRIGN VLRNPRYLRA AQELLEEFCC VGKGNLKSPK SENPRTISIV 300 ENASGGAVSS ASSKDRPPLS AAEKTEYQRK KVKLLSMLDE VDARYTHYCE QMQAIVHSFD 360 SVIGYGAAAP YTNLAQKAMS RHFRSIKDAI LGQVKVTCEL LGDKDVNGTI GLTKGETPRL 420 RWLEQKFRQQ KALHQLGMLD PETWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS 480 RQTGLSKNQV SNWFINARVR LWKPMVEDIY KEETKDEEQK KVTTVNHHAA NELAKSVDSV 540 DEEDHHNQNQ SQNQNQNQNQ NHNIVSAQTP MTNSKTTTAT TILSSSITTM TLVDGRRSEI 600 NAVEKDPSKN TINNGQYTLG NQAILQGTPS TTTPTSLISS PTFGHHHGQT LPTYGCFMAI 660 PDEAHVGMHG NATSRATNNI NTSGSLVGMG STSQAGDVSL TLGLRHPSSN LPRKRTEFSL 720 RDFGAF

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MSQSFHQGIY SFSNGYERSP TTTKQGMEWI SQRVQNFELQ QQQQVQTEVN SGEPPVYDDT  60
GGGMLTEMID FSRGRGKSAN HLLLDGQIPS SYRWSQKQQL PLTVVNEAEL LLMNPLHVKA  120
SSSSPTSTSS LHMSVPNSSD SHHPSLHLQE YHLENPSQFS WVRVNGNEVD DDNTKIGRAM  180
EAQGLSLSLS SSMPNLEAAK FQELRPGDGG VYFFDQGVGP PMNFSGFKNQ EPNPNILGNI  240
VTDYSSQVHV GLPASSRIGN VLRNPRYLRA AQELLEEFCC VGKGNLKSPK SENPRTISIV  300
ENASGGAVSS ASSKDRPPLS AAEKTEYQRK KVKLLSMLDE VDARYTHYCE QMQAIVHSFD  360
SVIGYGAAAP YTNLAQKAMS RHFRSIKDAI LGQVKVTCEL LGDKDVNGTI GLTKGETPRL  420
RWLEQKFRQQ KALHQLGMLD PETWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS  480
RQTGLSKNQV SNWFINARVR LWKPMVEDIY KEETKDEEQK KVTTVNHHAA NELAKSVDSV  540
DEEDHHNQNQ SQNQNQNQNQ NHNIVSAQTP MTNSKTTTAT TILSSSITTM TLVDGRRSEI  600
NAVEKDPSKN TINNGQYTLG NQAILQGTPS TTTPTSLISS PTFGHHHGQT LPTYGCFMAI  660
PDEAHVGMHG NATSRATNNI NTSGSLVGMG STSQAGDVSL TLGLRHPSSN LPRKRTEFSL  720
RDFGAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-121	TALE family protein