PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093136.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 230aa    MW: 26366.8 Da    PI: 10.3918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.56e-12104147151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_027093136.1 104 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 147
                     568***99..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVSIRRRKLL GSGRSNPFLA PLPKFSENGY TPEIRMQNTK PFSVHPIPSI DVDETKEKLS  60
PLKASGSSNV PACTELKEQH TRQFPEVKRR KRHRRKHFEN QEQCVMRGVY FKNMKWQAAI  120
KVDKKQIHLG TVGSQEEAAR LYDRAAFMCG REPNFELSEE EKQELRNFKW DEFLAITRSA  180
INHKKHHRRN GAGSRRKSES MMLKRALESE EGGNGLSGSE DTAEPDTSGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-43ERF family protein