PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027093553.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 208aa MW: 23244.6 Da PI: 9.2808

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027093553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60.1	7.6e-19	6	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 p GfrF+P++eel+ L kv+++ e+ +++ke +y +ePwd k +++++ +y F+k +k +a k++ r++ g XP_027093553.1 6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHVKEKILYgeGAEPWDVLGdddvrwqfcdnsgKGASTKRMVYVFTKLRKLSA--KKTARTAGLG 96 89**********.88999999988777.6777776662257*963468889988876533334557799999988765..699999* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +W k+ +v +ge++g +k+L + ++ + g+k W+mhey+l XP_027093553.1 97 TWDGETKSYPVEGMiTGEKIGSRKMLSYVLNSGSIGVKGGWIMHEYSL 144 999999998878999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MADNIPIGFR FRPSEEELIS LLWLKVTNQL DETDHVKEKI LYGEGAEPWD VLGDDDVRWQ 60 FCDNSGKGAS TKRMVYVFTK LRKLSAKKTA RTAGLGTWDG ETKSYPVEGM ITGEKIGSRK 120 MLSYVLNSGS IGVKGGWIMH EYSLDGASLN GLNSSHNTDY VLCRIIKDDS KYTKVKESAT 180 KGKVAKEKEV GNRGCREVVL GKRKMNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	2e-14	NAC family protein