PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027094681.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 265aa MW: 29449.4 Da PI: 7.2167

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027094681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.4	3.8e-34	17	71	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_027094681.1 17 KQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 71 79****************************************************8 PP
2	Myb_DNA-binding	63.8	3.4e-20	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_027094681.1 19 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 70 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MDFMNGGNNN AANLASKQRL RWTNELHERF VDAVAQLGGP DRATPKGVLR VMGVQGLTIY 60 HVKSHLQKYR LAKYLPDSSV DGKKLDKKDA KDMLAGLDGS SGMEITEALK LQMEVQKRLH 120 EQLEVQKQLQ LRIEAQGKYL KKIIEEQQRL NGVLPEGPSA GVTDNCADVE MRTDPGTPPP 180 TSEPPVIDKP TKDHPSTKSL SMDESFSPQE PQTPESGCHM NLFENIDADR SSKKQRVGLN 240 AAFSKPDMMF TQQLSGLHSV FPTRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-91	G2-like family protein