PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094904.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 238aa    MW: 25945.7 Da    PI: 9.1093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-193988255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r  r +lg+f+t  eAa a++aa++kl+g
  XP_027094904.1 39 AYKGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFDTSHEAAIAYDAAARKLYG 88
                    59****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEADRSGNGN GRPGKKPAQA SSRKGCMRGK GGPENASCAY KGVRQRTWGK WVAEIREPNR  60
GSRLWLGTFD TSHEAAIAYD AAARKLYGTA AKLNLPHLYR RPQHIPVYST LNTTTPIDTG  120
GENQTGLRPV PFQQSPFRNF ASSSNSSYPP QCQPNERLFF QTETNATTTG YLAGTTTAGV  180
TSVPNDNNNF VDDNGNEAVE SEEGTMRGMW NKLNANLPAI DDSSIWAEAQ AASLFRLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-47ERF family protein