PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027095183.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 277aa    MW: 30129.2 Da    PI: 5.4075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027095183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-17137188256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd    + k  r++lg+f++ae Aa  +++a+ +++g+
  XP_027095183.1 137 SYRGVRRRP-WGKYAAEIRDsT--R-KGIRVWLGTFDSAEAAALVYDQAAFCMRGP 188
                     69*******.**********32..2.24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEANRSLFQF HDSIILDCPF ESSSSFDSPQ PQSHSFTPSS SSSSSSLSTS SSSSSWDEVL  60
FQHNCDFLPF NFNDSQDMFL FDVLAEGAGA SARDASLRQS SSETNSNSNS NSNSSGGGVR  120
EEEVTSNVTK ETNKEKSYRG VRRRPWGKYA AEIRDSTRKG IRVWLGTFDS AEAAALVYDQ  180
AAFCMRGPMA VLNFPVDVVQ ESLRDMKCGS EGGGGGCSPV VALKHRHSIK KKKSSIRNHK  240
IAREAAAKVE NVVILEDLGA EYLEELLNSS SEIPAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-42ERF family protein