PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027095564.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 184aa    MW: 20811.6 Da    PI: 9.4699
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027095564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-203484155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  XP_027095564.1 34 SHFRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTAEEAALAYDEAARSLRG 84
                    78********.**********883....5999**********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MDVDHLHQEH NNANAAVRRG VQVTPSSLRV VKESHFRGVR KRPWGRYAAE IRDPWKKTRR  60
WLGTFDTAEE AALAYDEAAR SLRGPKAKTN FGSPALTPMS FTPPVMVQVP SVNPTGLAEN  120
FPHWCSPAFF ATDEADRSTE RAARSEYTGY KLETIGVMMS EREMDFKGEK KPFLFDLNLP  180
APLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-25ERF family protein