PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027095941.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 192aa    MW: 21953.7 Da    PI: 10.1897
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027095941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19113163155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr++  +g+WvAeIrdp     + k+++lg+++tae Aa a+++a+ +++g
  XP_027095941.1 113 KKFRGVRQRC-WGSWVAEIRDPI----KqKQVWLGTYDTAENAAIAYDRAAIQFRG 163
                     59*****876.**********72....35***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSNTEKVKYS EHLMQTTKFI SQSDVNAYPK VLGILVTDPH YTDSSSDEEG STSHRYRVKK  60
YINEIIFKHL PFEENCNNDG NVKEKPSNRN VAGNKRKRKG TEKAESKDES KRKKFRGVRQ  120
RCWGSWVAEI RDPIKQKQVW LGTYDTAENA AIAYDRAAIQ FRGTKAITNF LPPPPVKDEL  180
SSITTRAVNR TG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195114KRKRKGTEKAESKDESKRKK
296115KRKRKGTEKAESKDESKRKK
397116KRKRKGTEKAESKDESKRKK
4111137KRKKFRGVRQRCWGSWVAEIRDPIKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-31ERF family protein