PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096362.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 394aa    MW: 43018 Da    PI: 6.6161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-175099255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_027096362.1 50 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 99
                    59*******.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MEEAMRRLGC LTQAPESDPL LNTSAISKRC TTSTAKRSQK DGASNSGTMR YRGVRRRPWG  60
RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYPT SPSHDTLIPP  120
FHYSKSSSQP AFQSSRSSPH LADHFSGSAN QRNTTSNSVN MLFFRDLFNS SSTNSSILTS  180
SSTLPLYEQG PFANLNFSNS LMGNQSCNNN LTAPKTIDSL STTISLQQKF DEYQQTVCSG  240
VPTSSTSNNQ VECMDFFPSE PSDSGLLQEI IQGFLPKEKK IVKSEPELAL VDSFAASSSS  300
AVTTDVSMNL SLEGGGLKKR IGDAAYLDCH VPLPQLLDNF SAVVPPQPIP FYSEIYHPAE  360
NVQGSQECML GLGEGFHQYP DLLGAFAAAK MQNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.13e-18ERF family protein