PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096385.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 374aa    MW: 40681 Da    PI: 6.3211
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.3e-173683455
             AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + Vr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g
  XP_027096385.1 36 PRVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMRG 83
                    569*999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MDASSSRGSK KSNDEKKESA AATTRSIERR REQQVPRVRR RPWGRYAAEI RDPTTKERHW  60
LGTFDTAEEA ALAYDRAARS MRGSRARTNF VYSDMPPGSS VTSIVSPDES DSLIHHVHDH  120
DLSAAGLVLF SNSPQQQHQH QHHQQQFLFF GGHHETSNNH FTPAADGSGH YWNKWNHHHA  180
TCGGVAPAAA GTGNSTNVII NSLFQQEEDQ NTNSAAAPGD SYDNMMSSFL LYGNNSDDRS  240
SSSSGARAEL PPLPPDITSS YFGSATSEPP PLLLSDMGRG ILNDMSFLEL SERPSRPSFS  300
CTQGIMEYHD LVSSGTTGTA TAAAAATAGS CDFVHPSSSD SFGADHANVL DDHHHHLSCS  360
STNNSINFSS FGWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.13e-22ERF family protein